Package: metapr2 2.1.1
metapr2: Eukaryotic 18S rRNA metabarcode database
Provides an interface to the metaPR2 database (current version = 1.0) which contains eukaryotic 18S rRNA metabarcodes. Many options for selecting samples are provided. Data can be displayed as maps, barplots, treemaps. Data can be searched and downloaded. See https://pr2-database.org for more information.
Authors:
metapr2_2.1.1.tar.gz
metapr2_2.1.1.zip(r-4.5)metapr2_2.1.1.zip(r-4.4)metapr2_2.1.1.zip(r-4.3)
metapr2_2.1.1.tgz(r-4.4-any)metapr2_2.1.1.tgz(r-4.3-any)
metapr2_2.1.1.tar.gz(r-4.5-noble)metapr2_2.1.1.tar.gz(r-4.4-noble)
metapr2_2.1.1.tgz(r-4.4-emscripten)metapr2_2.1.1.tgz(r-4.3-emscripten)
metapr2.pdf |metapr2.html✨
metapr2/json (API)
NEWS
# Install 'metapr2' in R: |
install.packages('metapr2', repos = c('https://pr2database.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/pr2database/metapr2-shiny/issues
18s-rrnametabarcodingshiny-apps
Last updated 7 months agofrom:90d13e3a11. Checks:OK: 1 WARNING: 6. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Aug 13 2024 |
R-4.5-win | WARNING | Aug 13 2024 |
R-4.5-linux | WARNING | Aug 13 2024 |
R-4.4-win | WARNING | Aug 13 2024 |
R-4.4-mac | WARNING | Aug 13 2024 |
R-4.3-win | WARNING | Aug 13 2024 |
R-4.3-mac | WARNING | Aug 13 2024 |
Exports:run_app
Dependencies:ade4anytimeapeaskpassbackportsbase64encBHbillboarderBiobaseBiocGenericsbiomformatBiostringsbitbit64blasterblobbslibcachemcallrcellrangercheckmateclicliprclustercodetoolscolorspacecommonmarkcpp11crayoncrosstalkcurldata.tableDBIdescdigestdplyrDTevaluatefansifarverfastmapfontawesomeforcatsforeachforeignfsgenericsGenomeInfoDbGenomeInfoDbDataggfittextggforceggplot2gluegridExtragridtextgtablehavenhighrhmshtmltoolshtmlwidgetshttpuvhttrigraphIRangesisobanditeratorsjpegjquerylibjsonliteknitrlabelinglaterlatticelazyevalleafletleaflet.minichartsleaflet.providerslifecyclelobstrlubridatemagrittrmarkdownMASSMatrixmemoisemgcvmimemulttestmunsellnanotimenlmeopensslpatchworkpermutephyloseqpillarpixmappkgbuildpkgconfigpkgloadplogrplotlyplyrpngpolyclipprettyunitsprocessxprogresspromisespryrpspurrrqsR.methodsS3R.ooR.utilsR6RApiSerializerappdirsrasterRColorBrewerRcppRcppArmadilloRcppCCTZRcppDateRcppEigenRcppParallelreadrreadxlrematchreshape2rhdf5rhdf5filtersRhdf5libriorlangrmarkdownrprojrootRSQLiteS4VectorssassscalesscryptshadesshinyshinycssloadersshinydisconnectshinylogsshinymanagershinyvalidateshinyWidgetssourcetoolsspstringfishstringistringrsurvivalsyssystemfontsterratibbletidyrtidyselecttimechangetinytextreemapifytweenrtzdbUCSC.utilsutf8vctrsveganviridisviridisLitevroomwithrwritexlxfunxml2xtableXVectoryamlzlibbioczoo
Readme and manuals
Help Manual
Help page | Topics |
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Launch metapr2 shiny app | run_app |