Package: metapr2 3.0.1

Daniel Vaulot

metapr2: Eukaryotic 18S rRNA metabarcode database

Provides an interface to the metaPR2 database which contains eukaryotic 18S rRNA metabarcodes. Many options for selecting samples are provided. Data can be displayed as maps, barplots, treemaps. Data can be searched and downloaded. See https://pr2-database.org for more information.

Authors:Daniel Vaulot [aut, cre]

metapr2_3.0.1.tar.gz
metapr2_3.0.1.zip(r-4.7)metapr2_3.0.1.zip(r-4.6)metapr2_3.0.1.zip(r-4.5)
metapr2_3.0.1.tgz(r-4.6-any)metapr2_3.0.1.tgz(r-4.5-any)
metapr2_3.0.1.tar.gz(r-4.7-any)metapr2_3.0.1.tar.gz(r-4.6-any)
metapr2_3.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
metapr2/json (API)
NEWS

# Install 'metapr2' in R:
install.packages('metapr2', repos = c('https://pr2database.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/pr2database/metapr2-shiny/issues

On CRAN:

Conda:

18s-rrnametabarcodingshiny-apps

2.90 score 4 stars 1 exports 186 dependencies

Last updated from:2e942e494d. Checks:7 ERROR, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64ERROR194
source / vignettesOK261
linux-release-x86_64ERROR163
macos-release-arm64ERROR142
macos-oldrel-arm64ERROR187
windows-develERROR131
windows-releaseERROR157
windows-oldrelERROR113
wasm-releaseOK176

Exports:run_app

Dependencies:ade4anytimeapeaskpassbackportsbase64encBHbillboarderBiobaseBiocGenericsbiomformatBiostringsbitbit64blasterblobbslibcachemcallrcellrangercheckmateclassclassIntclicliprclustercodetoolscommonmarkcpp11crayoncrosstalkcurldata.tableDBIdescdigestdplyrDTe1071evaluatefarverfastmapfontawesomeforcatsforeachforeignfsgenericsggfittextggforceggplot2gluegridExtragridtextgtablehavenhighrhmshtmltoolshtmlwidgetshttpuvhttrigraphIRangesisobanditeratorsjpegjquerylibjsonliteKernSmoothknitrlabelinglaterlatticelazyevalleafletleaflet.minichartsleaflet.providerslifecyclelitedownlobstrlubridatemagrittrmarkdownMASSMatrixmemoisemgcvmimemulttestnanotimenlmeopensslotelpatchworkpermutephyloseqpillarpixmappkgbuildpkgconfigpkgloadplotlyplyrpngpolyclipprettyunitsprocessxprogresspromisesproxypspurrrqs2R.methodsS3R.ooR.utilsR6rappdirsrasterRColorBrewerRcppRcppArmadilloRcppCCTZRcppDateRcppParallelreadrreadxlrematchreshape2riorlangrmarkdownrprojrootRSQLites2S4VectorsS7sassscalesscryptSeqinfosfshadesshinyshinycssloadersshinydisconnectshinylogsshinymanagershinyvalidateshinyWidgetssourcetoolsspstringfishstringistringrsurvivalsvglitesyssystemfontsterratextshapingtibbletidyrtidyselecttimechangetinytextreemapifytweenrtzdbunitsutf8vctrsveganviridisviridisLitevroomwithrwkwritexlxfunxml2xtableXVectoryamlzoo